From 98a69683c2f59aa2018f9031b3cafd1959a97017 Mon Sep 17 00:00:00 2001 From: Matiss Ozols Date: Thu, 21 Oct 2021 19:04:48 +0100 Subject: [PATCH] added leicester profile --- docs/leicester.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/leicester.md b/docs/leicester.md index 3118022..72947f9 100644 --- a/docs/leicester.md +++ b/docs/leicester.md @@ -2,7 +2,7 @@ All nf-core pipelines have been successfully configured for use on the ALICE and SPECTRE cluster at the University of Leicester. Read more about lLicester HPC - https://uniofleicester.sharepoint.com/sites/research-computing/SitePages/alice.aspx -To use, run the pipeline with `-profile leicester`. This will download and launch the [`leicester.config`](../conf/leicester.config) which has been pre-configured with a setup suitable for the Leicester cluster. Using this profile, a docker image containing all of the required software will be downloaded, and converted to a Singularity image before execution of the pipeline. +To use, run the pipeline with `-profile leicester`. This will download and launch the [`leicester.config`](../conf/leicester.config ) which has been pre-configured with a setup suitable for the Leicester cluster. Using this profile, a docker image containing all of the required software will be downloaded, and converted to a Singularity image before execution of the pipeline. >NB: You will need an account to use the ALICE and SPECTRE cluster in order to run the pipeline. If in doubt contact IT. >NB: Nextflow will need to submit the jobs via the job scheduler to the HPC cluster and as such the commands above will have to be executed on one of the login nodes. If in doubt contact IT. \ No newline at end of file