mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-10 20:13:09 +00:00
fix for singularity cache for vsc_ugent profile
This commit is contained in:
parent
5fdc8b7b1b
commit
98eacf030d
1 changed files with 4 additions and 5 deletions
|
@ -19,6 +19,10 @@ singularity {
|
|||
cacheDir = "$scratch_dir/singularity"
|
||||
}
|
||||
|
||||
env {
|
||||
SINGULARITY_CACHEDIR=$scratch_dir/.singularity
|
||||
}
|
||||
|
||||
// Define profiles for each cluster
|
||||
profiles {
|
||||
skitty {
|
||||
|
@ -35,7 +39,6 @@ profiles {
|
|||
executor = 'slurm'
|
||||
queue = 'skitty'
|
||||
maxRetries = 2
|
||||
beforeScript = "export SINGULARITY_CACHEDIR=$scratch_dir/.singularity"
|
||||
scratch = "$scratch_dir"
|
||||
}
|
||||
}
|
||||
|
@ -54,7 +57,6 @@ profiles {
|
|||
executor = 'slurm'
|
||||
queue = 'swalot'
|
||||
maxRetries = 2
|
||||
beforeScript = "export SINGULARITY_CACHEDIR=$scratch_dir/.singularity"
|
||||
scratch = "$scratch_dir"
|
||||
}
|
||||
}
|
||||
|
@ -73,7 +75,6 @@ profiles {
|
|||
executor = 'slurm'
|
||||
queue = 'victini'
|
||||
maxRetries = 2
|
||||
beforeScript = "export SINGULARITY_CACHEDIR=$scratch_dir/.singularity"
|
||||
scratch = "$scratch_dir"
|
||||
}
|
||||
}
|
||||
|
@ -92,7 +93,6 @@ profiles {
|
|||
executor = 'slurm'
|
||||
queue = 'kirlia'
|
||||
maxRetries = 2
|
||||
beforeScript = "export SINGULARITY_CACHEDIR=$scratch_dir/.singularity"
|
||||
scratch = "$scratch_dir"
|
||||
}
|
||||
}
|
||||
|
@ -111,7 +111,6 @@ profiles {
|
|||
executor = 'slurm'
|
||||
queue = 'doduo'
|
||||
maxRetries = 2
|
||||
beforeScript = "export SINGULARITY_CACHEDIR=$scratch_dir/.singularity"
|
||||
scratch = "$scratch_dir"
|
||||
}
|
||||
}
|
||||
|
|
Loading…
Reference in a new issue