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Update conf/pipeline/sarek/uppmax.config

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Maxime Garcia 2020-02-27 17:22:03 +01:00 committed by GitHub
parent 8acbdacf03
commit 9a8bb12020
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1 changed files with 3 additions and 1 deletions
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conf/pipeline/sarek/uppmax.config
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@ -9,7 +9,9 @@ params {
igenomeIgnore = true igenomeIgnore = true
genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle' genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle'
} }
if (hostname ==~ "r.*") {
params.singleCPUmem = 6400.MB
}
if (hostname ==~ "i.*") { if (hostname ==~ "i.*") {
params.singleCPUmem = 15.GB params.singleCPUmem = 15.GB
} }