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Update mpcdf.md

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James A. Fellows Yates 2020-09-03 20:27:15 +02:00 committed by GitHub
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@ -6,11 +6,11 @@ All nf-core pipelines have been successfully configured for use on the HPCs at [
To run Nextflow, the `jdk` module must be loaded. To use the nf-core profile(s), run the pipeline with `-profile <cluster>,mpcdf`. To run Nextflow, the `jdk` module must be loaded. To use the nf-core profile(s), run the pipeline with `-profile <cluster>,mpcdf`.
Currently the following clusters are supported: cobra, draco* (* coming soon) Currently the following clusters are supported: cobra, draco\* (\* coming soon)
>NB: Nextflow will need to submit the jobs via SLURM to the clusters and as such the commands above will have to be executed on one of the head nodes. Check the [MPCDF documentation](https://www.mpcdf.mpg.de/services/computing). >NB: Nextflow will need to submit the jobs via SLURM to the clusters and as such the commands above will have to be executed on one of the head nodes. Check the [MPCDF documentation](https://www.mpcdf.mpg.de/services/computing).
# cobra ## cobra
Cobra does not currently support singularity, therefore the anaconda/module is loaded for each process. Cobra does not currently support singularity, therefore the anaconda/module is loaded for each process.
@ -25,5 +25,4 @@ Max. memory: 750.GB
Max. CPUs: 80 Max. CPUs: 80
Max. walltime: 24.h Max. walltime: 24.h
# draco ## draco