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update file

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This commit is contained in:
MaxUlysse 2020-02-24 14:36:45 +01:00
parent aa905cd645
commit 9f74e88041
1 changed files with 1 additions and 6 deletions
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7
conf/pipeline/sarek/uppmax.config
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@ -5,13 +5,8 @@ params {
config_profile_description = 'nf-core/sarek uppmax profile provided by nf-core/configs' config_profile_description = 'nf-core/sarek uppmax profile provided by nf-core/configs'
} }
if (hostname ==~ "i.*") {
singularity {
cacheDir = "${params.containers_path}"
}
}
params { params {
// Just useful until iGenomes is updated on UPPMAX
igenomeIgnore = true igenomeIgnore = true
genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle' genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle'
} }