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Merge pull request #209 from phue/cbe_rapid_qos

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cbe: add rapid qos
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Patrick Hüther 2021-03-10 21:03:08 +01:00 committed by GitHub
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1 changed files with 2 additions and 2 deletions
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conf/cbe.config
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@ -2,13 +2,13 @@
params { params {
config_profile_description = 'CLIP BATCH ENVIRONMENT (CBE) cluster profile provided by nf-core/configs' config_profile_description = 'CLIP BATCH ENVIRONMENT (CBE) cluster profile provided by nf-core/configs'
config_profile_contact = 'Patrick Hüther (@phue)' config_profile_contact = 'Patrick Hüther (@phue)'
config_profile_url = 'http://www.gmi.oeaw.ac.at/' config_profile_url = 'https://clip.science'
} }
process { process {
executor = 'slurm' executor = 'slurm'
queue = { task.memory <= 170.GB ? 'c' : 'm' } queue = { task.memory <= 170.GB ? 'c' : 'm' }
clusterOptions = { task.time <= 8.h ? '--qos short': task.time <= 48.h ? '--qos medium' : '--qos long' } clusterOptions = { task.time <= 1.h ? '--qos rapid' : task.time <= 8.h ? '--qos short': task.time <= 48.h ? '--qos medium' : '--qos long' }
module = 'anaconda3/2019.10' module = 'anaconda3/2019.10'
} }