From a67e77bb57095f465b8b0461df2d506c59bc8083 Mon Sep 17 00:00:00 2001 From: Adrian Larkeryd Date: Thu, 5 Mar 2020 10:42:18 +0000 Subject: [PATCH] put comments back in correct format --- conf/icr_davros.config | 16 +++++++++++++--- 1 file changed, 13 insertions(+), 3 deletions(-) diff --git a/conf/icr_davros.config b/conf/icr_davros.config index c6c3024..e4928ca 100644 --- a/conf/icr_davros.config +++ b/conf/icr_davros.config @@ -1,4 +1,11 @@ - +/* + * ------------------------------------------------- + * Nextflow nf-core config file for ICR davros HPC + * ------------------------------------------------- + * Defines LSF process executor and singularity + * settings. + * + */ params { config_profile_description = "Nextflow nf-core profile for ICR davros HPC" config_profile_contact = "Adrian Larkeryd" @@ -10,7 +17,9 @@ singularity { } executor { - + // This is set because of an issue with too many + // singularity containers launching at once, they + // cause an singularity error with exit code 255. submitRateLimit = "2 sec" } @@ -19,7 +28,8 @@ process { } params { - + // LSF cluster set up with memory tied to cores, + // it can't be requested. Locked at 12G per core. cpus = 10 max_cpus = 20 max_memory = 12.GB