From a8faeda14130ada4323121e6e40ee9ad34b8bdd8 Mon Sep 17 00:00:00 2001
From: Simon Pearce <24893913+SPPearce@users.noreply.github.com>
Date: Thu, 1 Sep 2022 11:23:07 +0100
Subject: [PATCH] Update crukmi.config

---
 conf/pipeline/sarek/crukmi.config | 15 ---------------
 1 file changed, 15 deletions(-)

diff --git a/conf/pipeline/sarek/crukmi.config b/conf/pipeline/sarek/crukmi.config
index 0b2aecd..66a0b85 100644
--- a/conf/pipeline/sarek/crukmi.config
+++ b/conf/pipeline/sarek/crukmi.config
@@ -16,18 +16,3 @@ process {
   }
 
 }
-
-def check_resource(obj) {
-    try {
-      if (obj.getClass() == nextflow.util.MemoryUnit && obj.compareTo(params.max_memory as nextflow.util.MemoryUnit) == 1)
-        return params.max_memory as nextflow.util.MemoryUnit
-      else if (obj.getClass() == nextflow.util.Duration && obj.compareTo(params.max_time as nextflow.util.Duration) == 1)
-        return params.max_time as nextflow.util.Duration
-      else if (obj.getClass() == java.lang.Integer)
-        return Math.min(obj, params.max_cpus as int)
-      else
-        return obj
-    } catch (all) {
-        println "   ### ERROR ###   Max params max_memory:'${params.max_memory}', max_time:'${params.max_time}' or max_cpus:'${params.max_cpus}'  is not valid! Using default value: $obj"
-    }
-}