From af9b9916fb2f378c6f6c22ca4bb8241fffc49219 Mon Sep 17 00:00:00 2001 From: alexandregilardet <63741852+alexandregilardet@users.noreply.github.com> Date: Wed, 16 Mar 2022 15:44:13 +0000 Subject: [PATCH] Update and rename custom_crick.config to crick.config --- .../eager/{custom_crick.config => crick.config} | 13 ++++++++++--- 1 file changed, 10 insertions(+), 3 deletions(-) rename conf/pipeline/eager/{custom_crick.config => crick.config} (72%) diff --git a/conf/pipeline/eager/custom_crick.config b/conf/pipeline/eager/crick.config similarity index 72% rename from conf/pipeline/eager/custom_crick.config rename to conf/pipeline/eager/crick.config index 8d3e3c0..bcebea0 100644 --- a/conf/pipeline/eager/custom_crick.config +++ b/conf/pipeline/eager/crick.config @@ -3,10 +3,17 @@ * Nextflow custom config file for running nf-core eager on data generated at the Francis Crick Institute * contact: Alexandre Gilardet alexandre.gilardet@crick.ac.uk * ------------------------------------------------- - * nextflow run nf-core/eager -profile ,crick -c custom_crick.config - * (where is screening or production for low or high-coverage data - * respectively, or external for very high coverage) + * nextflow run nf-core/eager -profile ,crick -c crick.config + * (where is screening, production or external) */ + + params { + + config_profile_name = 'nf-core/eager crick screening, production & external profiles' + + config_profile_description = "Profiles for ressources fitting low & high coverage data generated at the Crick (screening & production respectively). Option for higher coverage external data." + +} profiles { screening {