From b269a577e686a3ff3a7744ad01ab5850d56a17f6 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Mon, 18 Oct 2021 10:52:28 +0200 Subject: [PATCH] Revert 1240k --- conf/pipeline/eager/eva.config | 22 ---------------------- 1 file changed, 22 deletions(-) diff --git a/conf/pipeline/eager/eva.config b/conf/pipeline/eager/eva.config index 5f0eaae..cf9a9ea 100644 --- a/conf/pipeline/eager/eva.config +++ b/conf/pipeline/eager/eva.config @@ -472,26 +472,4 @@ profiles { bwaalnl = 16500 } } - 1240k { - params { - // Specific nf-core/configs params - config_profile_contact = 'Thiseas C. Lamnidis (@TCLamnidis)' - config_profile_description = 'nf-core/eager 1240k data EVA profile provided by nf-core/configs' - } - - executor { - queueSize = 6 - } - - process { - // Increasing walltime for bwa to avoid unnecessary retries - withName:bwa { - time = { task.attempt == 3 ? 1440.h : task.attempt == 2 ? 72.h : 48.h } - } - - withName:markduplicates { - memory = { task.attempt == 3 ? 16.GB : task.attempt == 2 ? 8.GB : 4.GB } - } - } - } }