requires files edited

.github/workflows/main.yml

@@ -52,6 +52,8 @@ jobs:
             - 'nu_genomics'
             - 'oist'
             - 'pasteur'
+            - 'pasteurNorm'
+            - 'pasteurLong'
             - 'phoenix'
             - 'prince'
             - 'sanger'

README.md

@@ -121,6 +121,8 @@ Currently documentation is available for the following systems:
 * [NU_GENOMICS](docs/nu_genomics.md)
 * [OIST](docs/oist.md)
 * [PASTEUR](docs/pasteur.md)
+* [PASTEURNORM](docs/pasteurMaestroNormal.md)
+* [PASTEURLONG](docs/pasteurMaestroLong.md)
 * [PHOENIX](docs/phoenix.md)
 * [PRINCE](docs/prince.md)
 * [SANGER](docs/sanger.md)

docs/pasteurMaestroLong.md

@@ -0,0 +1,8 @@
+# nf-core/configs: Institut Pasteur Configuration on Maestro
+
+This is an intent for configuration of nf-core in Maestro cluster on the long qos
+
+I am not expert of nf-core so pelase refer to  docs/pasteur.md for installing and running nf-core 
+
+Run the pipeline with `-profile pasteurLong`
+

docs/pasteurMaestroNormal.md

@@ -0,0 +1,8 @@
+# nf-core/configs: Institut Pasteur Configuration on Maestro
+
+This is an intent for configuration of nf-core in Maestro cluster on the normal qos
+
+I am not expert of nf-core so pelase refer to  docs/pasteur.md for installing and running nf-core 
+
+Run the pipeline with `-profile pasteurNorm`
+

nfcore_custom.config

@@ -46,6 +46,8 @@ profiles {
   nu_genomics  { includeConfig "${params.custom_config_base}/conf/nu_genomics.config" }
   oist         { includeConfig "${params.custom_config_base}/conf/oist.config" }
   pasteur      { includeConfig "${params.custom_config_base}/conf/pasteur.config" }
+  pasteurNorm  { includeConfig "${params.custom_config_base}/conf/pasteurMaestroNormal.config" }
+  pasteurLong  { includeConfig "${params.custom_config_base}/conf/pasteurMaestroLong.config" }
   phoenix      { includeConfig "${params.custom_config_base}/conf/phoenix.config" }
   prince       { includeConfig "${params.custom_config_base}/conf/prince.config" }
   sanger       { includeConfig "${params.custom_config_base}/conf/sanger.config"}