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Create ceh.config
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conf/ceh.config
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conf/ceh.config
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//Profile config names for nf-core/configs
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params {
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config_profile_description = 'Centre for Evolutionary Hologenomics - CEH profile provided by nf-core/configs.'
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config_profile_contact = 'Aashild Vaagene (@ashildv)'
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}
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profiles {
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ceh {
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singularity {
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enabled = true
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autoMounts = true
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cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
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}
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process {
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executor = 'slurm'
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queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
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}
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cleanup = true
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executor {
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queueSize = 8
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}
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params {
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max_memory = 250.GB
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max_cpus = 35
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max_time = 720.h
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}
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}
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}
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