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Updating CCGA config file

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marchoeppner 2019-07-05 08:03:37 +02:00
parent 45d36a1506
commit cb507177d5
1 changed files with 10 additions and 2 deletions
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12
conf/ccga.config
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@ -2,15 +2,20 @@
params { params {
config_profile_description = 'CCGA cluster profile provided by nf-core/configs.' config_profile_description = 'CCGA cluster profile provided by nf-core/configs.'
config_profile_contact = 'Marc Hoeppner (@marchoeppner)' config_profile_contact = 'Marc Hoeppner (@marchoeppner)'
config_profile_url = 'https://www.ikmb.uni-kiel.de/' config_profile_url = 'https://www.ccga.uni-kiel.de/'
} }
/* /*
* ------------------------------------------------- * -------------------------------------------------
* Nextflow config file with environment modules for RZCluster in Kiel * Nextflow config file for CCGA cluster in Kiel
* ------------------------------------------------- * -------------------------------------------------
*/ */
singularity {
enabled = true
runOptions = "-B /ifs -B /scratch -B /work_beegfs"
}
executor { executor {
queueSize=100 queueSize=100
} }
@ -29,4 +34,7 @@ params {
// illumina iGenomes reference file paths on RZCluster // illumina iGenomes reference file paths on RZCluster
igenomes_base = '/ifs/data/nfs_share/ikmb_repository/references/iGenomes/references/' igenomes_base = '/ifs/data/nfs_share/ikmb_repository/references/iGenomes/references/'
saveReference = true saveReference = true
max_memory = 128.GB
max_cpus = 16
max_time = 120.h
} }