From d3e5c79fb4464c89e1bb54cab12be484446d0506 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=C3=85shild=20J=2E=20V=C3=A5gene?= <60298098+ashildv@users.noreply.github.com> Date: Fri, 20 May 2022 15:44:20 +0200 Subject: [PATCH] Create holo_globe --- conf/holo_globe | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) create mode 100644 conf/holo_globe diff --git a/conf/holo_globe b/conf/holo_globe new file mode 100644 index 0000000..f10bcd8 --- /dev/null +++ b/conf/holo_globe @@ -0,0 +1,26 @@ +//Profile config names for nf-core/configs +params { + config_profile_description = 'Section for Hologenomics @ Globe Institute, University of Copenhagen - seg_globe profile provided by nf-core/configs.' + config_profile_contact = 'Aashild Vaagene (@ashildv)' + config_profile_url = 'https://globe.ku.dk/research/evogenomics/' + max_memory = 250.GB + max_cpus = 35 + max_time = 720.h +} + +//singularity { +// enabled = true +// autoMounts = true +// cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity' +//} + +process { + executor = 'slurm' + queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' } +} + +cleanup = true + +executor { + queueSize = 8 +}