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Updated process names according to ampliseq main.nf

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This commit is contained in:
Emelie Nilsso 2020-11-25 17:50:30 +01:00
parent 37e7cfae2c
commit d61ed01d2d
1 changed files with 3 additions and 3 deletions
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6
conf/pipeline/ampliseq/uppmax.config
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@ -11,12 +11,12 @@ process {
clusterOptions = { "-A $params.project -C fat -p node -N 1 -t 7-00:00:00 ${params.clusterOptions ?: ''}" } clusterOptions = { "-A $params.project -C fat -p node -N 1 -t 7-00:00:00 ${params.clusterOptions ?: ''}" }
} }
//"clfr_extract_seq" and "clfr_train" is the newer version, where database preparation is split in two to optimise resources //"classifier_extract_seq" and "classifier_train" is the newer version, where database preparation is split in two to optimise resources
withName: clfr_extract_seq { withName: classifier_extract_seq {
clusterOptions = { "-A $params.project -p core -n 1 -t 7-00:00:00 ${params.clusterOptions ?: ''}" } clusterOptions = { "-A $params.project -p core -n 1 -t 7-00:00:00 ${params.clusterOptions ?: ''}" }
} }
withName: clfr_train { withName: classifier_train {
clusterOptions = { "-A $params.project -C fat -p node -N 1 -t 24:00:00 ${params.clusterOptions ?: ''}" } clusterOptions = { "-A $params.project -C fat -p node -N 1 -t 24:00:00 ${params.clusterOptions ?: ''}" }
} }