From d6813d9c39b8b5458cca8df032957843f554d643 Mon Sep 17 00:00:00 2001
From: FriederikeHanssen <friederike.hanssen@qbic.uni-tuebingen.de>
Date: Mon, 4 May 2020 17:09:43 +0200
Subject: [PATCH] Add scratch = true to avoid writing of intermediate file to
 /tmp

---
 conf/cfc.config     | 1 +
 conf/cfc_dev.config | 1 +
 2 files changed, 2 insertions(+)

diff --git a/conf/cfc.config b/conf/cfc.config
index 62d3626..ffe0395 100644
--- a/conf/cfc.config
+++ b/conf/cfc.config
@@ -14,6 +14,7 @@ process {
   beforeScript = 'module load devel/singularity/3.4.2'
   executor = 'slurm'
   queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' : 'compute' }
+  scratch = 'true'
 }
 
 weblog{
diff --git a/conf/cfc_dev.config b/conf/cfc_dev.config
index a7ebf2f..6190314 100644
--- a/conf/cfc_dev.config
+++ b/conf/cfc_dev.config
@@ -13,6 +13,7 @@ process {
   beforeScript = 'module load devel/singularity/3.4.2'
   executor = 'slurm'
   queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' : 'compute' }
+  scratch = 'true'
 }
 
 weblog{