From d7d9951dbf002fbc7e4aaaa207bd38163fa4d2dd Mon Sep 17 00:00:00 2001
From: "James A. Fellows Yates" <jfy133@gmail.com>
Date: Mon, 28 Feb 2022 14:00:16 +0100
Subject: [PATCH] Insert h_vmem for all nf-core pipelines

---
 conf/eva.config | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/conf/eva.config b/conf/eva.config
index 432b667..07ce226 100644
--- a/conf/eva.config
+++ b/conf/eva.config
@@ -17,6 +17,7 @@ process {
     executor = 'sge'
     penv = 'smp'
     queue = 'all.q'
+    clusterOptions = { "-S /bin/bash -V -j y -o output.log -l h_vmem=${task.memory.toGiga()}G" }
 }
 
 executor {
@@ -36,6 +37,7 @@ profiles {
 
       process {
         queue = 'archgen.q'
+        clusterOptions = { "-S /bin/bash -V -j y -o output.log -l h_vmem=${task.memory.toGiga()}G" }
       }
 
       singularity {