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Remove --custom_config_base from CI test command
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.github/workflows/main.yml
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.github/workflows/main.yml
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@ -27,4 +27,4 @@ jobs:
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env:
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SCRATCH: '~'
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NXF_GLOBAL_CONFIG: awsbatch.config
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run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }}
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run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf -profile ${{ matrix.profile }}
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