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Move sdag queue specification block in sdag profile

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Thiseas C. Lamnidis 2020-11-17 19:45:06 +01:00 committed by GitHub
parent be9cb33ac1
commit da781907f2
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conf/shh.config
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@ -20,7 +20,6 @@ singularity {
process { process {
executor = 'slurm' executor = 'slurm'
queue = { task.memory > 756.GB || task.cpus > 64 ? 'supercruncher': task.time <= 2.h ? 'short' : task.time <= 48.h ? 'medium': 'long' }
} }
executor { executor {
@ -42,6 +41,7 @@ profiles {
config_profile_description = 'SDAG MPI-SHH profile, provided by nf-core/configs.' config_profile_description = 'SDAG MPI-SHH profile, provided by nf-core/configs.'
max_memory = 2.TB max_memory = 2.TB
max_cpus = 128 max_cpus = 128
queue = { task.memory > 756.GB || task.cpus > 64 ? 'supercruncher': task.time <= 2.h ? 'short' : task.time <= 48.h ? 'medium': 'long' }
} }
} }
} }