From dc2735207e297a9bf9a9208d8b551b3a9f0f6eb4 Mon Sep 17 00:00:00 2001 From: Edmund Miller Date: Sun, 13 Sep 2020 20:26:45 -0500 Subject: [PATCH] feat(utd): add Kim queue --- conf/utd_ganymede.config | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/conf/utd_ganymede.config b/conf/utd_ganymede.config index 465deb5..ce975bd 100644 --- a/conf/utd_ganymede.config +++ b/conf/utd_ganymede.config @@ -12,13 +12,13 @@ singularity { } process { - beforeScript = 'module load singularity/2.4.5' + beforeScript = 'module load singularity/3.2.1' executor = 'slurm' - queue = 'genomics' + queue = { task.memory >= 32.GB ? 'Kim': task.memory <= 24.GB && task.cpu <= 8 ? 'smallmem' : 'genomics' } } params { - max_memory = 32.GB + max_memory = 128.GB max_cpus = 16 - max_time = 48.h + max_time = 96.h }