From dcb478c904d35b3b49db20abc4a2ecdf990e3dc1 Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Mon, 9 Mar 2020 17:07:03 +0200 Subject: [PATCH] Update ebc.md --- docs/ebc.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docs/ebc.md b/docs/ebc.md index 45c9415..71f2622 100644 --- a/docs/ebc.md +++ b/docs/ebc.md @@ -3,6 +3,8 @@ All nf-core pipelines have been successfully configured for use on the [Estonian Biocentre (EBC)](https://genomics.ut.ee/en/about-us/estonian-biocentre) cluster at the [High Performance Computing Center](https://hpc.ut.ee/en) of the the University of Tartu. To use, run the pipeline with `-profile ebc`. This will download and launch the [`ebc.config`](../conf/ebc.config) which has been pre-configured with a setup suitable for the EBC cluster. Using this profile, currently, a conda environment containing all of the required software will be downloaded and stored in a central location. +> :warning: You must install your own [conda binary](conda.io) to run nf-core pipelines in a conda environment. Running with singularity will be added soon. + The profile will put a maximum job limit of 12 GB, 20 CPUs and a maximum wall time of 120 hours. NB: You will need an account to use the HPC cluster on EBC cluster in order to run the pipeline. If in doubt contact IT.