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Merge pull request #147 from nf-core/MaxUlysse-patch-1
Update uppmax.config
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commit
de5b7717ff
1 changed files with 4 additions and 0 deletions
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@ -9,9 +9,13 @@ params {
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igenomeIgnore = true
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igenomeIgnore = true
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genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle'
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genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle'
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}
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}
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def hostname = "hostname".execute().text.trim()
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if (hostname ==~ "r.*") {
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if (hostname ==~ "r.*") {
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params.singleCPUmem = 6400.MB
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params.singleCPUmem = 6400.MB
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}
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}
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if (hostname ==~ "i.*") {
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if (hostname ==~ "i.*") {
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params.singleCPUmem = 15.GB
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params.singleCPUmem = 15.GB
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}
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}
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