From e1d0bf0cd2b4156a6dd8922630bdb8521744a973 Mon Sep 17 00:00:00 2001
From: Combiz Khozoie <31043044+combiz@users.noreply.github.com>
Date: Thu, 10 Feb 2022 23:44:49 +0000
Subject: [PATCH] Delete imperial_mb.config

Separate config for the medbio queue now deprecated in favour of an internal profile within the main imperial.config
---
 conf/imperial_mb.config | 44 -----------------------------------------
 1 file changed, 44 deletions(-)
 delete mode 100644 conf/imperial_mb.config

diff --git a/conf/imperial_mb.config b/conf/imperial_mb.config
deleted file mode 100644
index 72bc412..0000000
--- a/conf/imperial_mb.config
+++ /dev/null
@@ -1,44 +0,0 @@
-//Profile config names for nf-core/configs
-
-params {
-  // Config Params
-  config_profile_description = 'Imperial College London - MEDBIO QUEUE - HPC Profile -- provided by nf-core/configs.'
-  config_profile_contact = 'NA'
-  config_profile_url = 'https://www.imperial.ac.uk/bioinformatics-data-science-group/resources/uk-med-bio/'
-
-  // Resources
-  max_memory = 640.GB
-  max_cpus = 32
-  max_time = 168.h
-}
-
-executor {
-  $pbspro {
-    queueSize = 50
-  }
-
-  $local {
-    cpus = 2
-    queueSize = 1
-    memory = '32 GB'
-  }
-}
-
-singularity {
-  enabled = true
-  autoMounts = true
-  runOptions = "-B /rds/,/rdsgpfs/,/rds/general/user/$USER/ephemeral/tmp/:/tmp,/rds/general/user/$USER/ephemeral/tmp/:/var/tmp"
-}
-
-process {
-
-  executor = 'pbspro'
-  queue = 'pqmedbio-tput'
-
-  //queue = 'med-bio' //!! this is an alias and shouldn't be used
-
-  //withLabel:process_large {
-    //queue = 'pqmedbio-large' //!! this queue is unavailable as of Feb 2022
-  //}
-
-}