From e1e0810d1b7fcd3be7593c6a11df359aaa472f6c Mon Sep 17 00:00:00 2001
From: Rogan Grant <rogangrant2022@u.northwestern.edu>
Date: Wed, 28 Jul 2021 13:44:48 -0500
Subject: [PATCH] Clean up module loading script

---
 conf/nu_genomics.config | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/conf/nu_genomics.config b/conf/nu_genomics.config
index 6da5642..b5bb27c 100644
--- a/conf/nu_genomics.config
+++ b/conf/nu_genomics.config
@@ -20,7 +20,12 @@ singularity
 
 process
 {
-  beforeScript = 'module load singularity/latest graphviz/2.40.1'
+  beforeScript = ""
+                    module purge
+                    module load singularity/latest
+                    module load graphviz/2.40.1s
+                 ""
+                 .stripIndent()
   executor = 'slurm'
 }