From e32f1e46ff77577538250b85fedde397cb23003e Mon Sep 17 00:00:00 2001
From: "James A. Fellows Yates" <jfy133@gmail.com>
Date: Thu, 4 Feb 2021 08:13:16 +0100
Subject: [PATCH] Update shh.config

---
 conf/pipeline/eager/shh.config | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/conf/pipeline/eager/shh.config b/conf/pipeline/eager/shh.config
index ab0d0fb..44d1c3c 100644
--- a/conf/pipeline/eager/shh.config
+++ b/conf/pipeline/eager/shh.config
@@ -82,7 +82,7 @@ profiles {
 
       maxRetries = 2
 
-        withName: 'malt' {
+        withName:malt {
           maxRetries = 1
           memory = { task.attempt > 1 ? 1900.GB : 725.GB }
           cpus = { task.attempt > 1 ? 112 : 64 }
@@ -90,10 +90,11 @@ profiles {
           queue = { task.memory > 756.GB ? 'supercruncher' : 'long' }
         }
         
-        withName: 'hostremoval_input_fastq' {
+        withName:hostremoval_input_fastq {
           cpus = { check_max( 1, 'cpus' ) }
           memory = { check_max( 32.GB * task.attempt, 'memory' ) }
-          time = { task.attempt == 3 ? 1440.h : task.attempt == 2 ? 48.h : 2.h }
+          time = 1440.h
+          queue = 'long'
         }
 
         withLabel:'sc_tiny'{