From e7ac3ecd1934b8554ec28c02e00998e0e4869d22 Mon Sep 17 00:00:00 2001
From: lquayle88 <drlquayle@gmail.com>
Date: Sun, 2 Oct 2022 00:24:39 +0100
Subject: [PATCH] Modified resource requests in sbc_sharc.config for sarek

---
 conf/pipeline/sarek/sbc_sharc.config | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf/pipeline/sarek/sbc_sharc.config b/conf/pipeline/sarek/sbc_sharc.config
index 170b8bd..d970574 100644
--- a/conf/pipeline/sarek/sbc_sharc.config
+++ b/conf/pipeline/sarek/sbc_sharc.config
@@ -76,7 +76,7 @@ process {
 
     withName:'GATK4_MARKDUPLICATES' {
         cpus    = { check_max( 8 * task.attempt, 'cpus' ) }
-        memory  = { check_max( 30.GB * task.attempt, 'memory' ) }
+        memory  = { check_max( 16.GB * task.attempt, 'memory' ) }
         time    = { check_max( 8.h * task.attempt, 'time' ) }
     }