From e8ce4fe8df0228eec7a70bc40562a482e3baadce Mon Sep 17 00:00:00 2001 From: Matiss Ozols Date: Thu, 21 Oct 2021 18:59:17 +0100 Subject: [PATCH] added leicester profile --- conf/leicester.config | 16 ++++++++++++++++ 1 file changed, 16 insertions(+) create mode 100644 conf/leicester.config diff --git a/conf/leicester.config b/conf/leicester.config new file mode 100644 index 0000000..d91a006 --- /dev/null +++ b/conf/leicester.config @@ -0,0 +1,16 @@ +//Profile config names for nf-core/configs +params { + config_profile_description = 'ALICE and SPECTRE cluster profile provided by nf-core/configs.' + config_profile_contact = 'Matiss Ozols - mo246@leichester.ac.uk | mo11@sanger.ac.uk | matiss.ozols@manchester.ac.uk | mo513@cam.ac.uk' +} + +singularity { + enabled = true + envWhitelist = 'TZ' +} + +process { + executor = 'pbs' + queue = { task.time <= 24.h ? 'short' : task.time > 672.h ? 'long' : 'medium'} +} +