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Removes the new SGE clusterOptions for now
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@ -26,9 +26,6 @@ process {
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memory = 64.GB
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ext.args = "--java-mem-size=60G"
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}
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withName: 'PICARD_COLLECTHSMETRICS|PICARD_COLLECTMULTIPLEMETRICS|COLLECTREADCOUNTS|DENOISEREADCOUNTS' {
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clusterOptions = { task.memory ? "-l h_vmem=${task.memory.bytes/task.cpus}+2" : null }
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}
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}
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profiles {
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