From eacdf89e534acd9db3837057f9439875fa3079df Mon Sep 17 00:00:00 2001
From: "James A. Fellows Yates" <jfy133@gmail.com>
Date: Tue, 20 Apr 2021 13:17:35 +0200
Subject: [PATCH] Update eva.config

---
 conf/pipeline/eager/eva.config | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/conf/pipeline/eager/eva.config b/conf/pipeline/eager/eva.config
index 2e07d57..fa7667d 100644
--- a/conf/pipeline/eager/eva.config
+++ b/conf/pipeline/eager/eva.config
@@ -61,7 +61,7 @@ process {
   // Fixes for SGE and Java incompatibility due to Java using more memory than you tell it to use
 
   withName: makeSeqDict {
-    clusterOptions = { "-S /bin/bash -v JAVA_OPTS='-XX:ParallelGCThreads=1' -l h_vmem=${(task.memory.toGiga() + 3)}G,virtual_free=${(task.memory.toGiga() + 3)}G" }
+    clusterOptions = { "-S /bin/bash -l h_vmem=${(task.memory.toGiga() * 2)}G,virtual_free=${(task.memory.toGiga() * 2)}G" }
    }
       
   withName: fastqc {
@@ -212,4 +212,4 @@ profiles {
       bwaalnl = 16500
      }
   }
-}
\ No newline at end of file
+}