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Adrian Larkeryd 2020-03-05 09:24:10 +00:00
parent 02d8b81af4
commit ead67d1e90
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7
conf/icr_davros.config
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@ -6,20 +6,27 @@
* settings. * settings.
* *
*/ */
params {
config_profile_description = "Nextflow nf-core profile for ICR davros HPC"
config_profile_contact = "Adrian Larkeryd"
}
singularity { singularity {
enabled = true enabled = true
runOptions = "--bind /mnt:/mnt --bind /data:/data" runOptions = "--bind /mnt:/mnt --bind /data:/data"
} }
executor { executor {
# This is set because of an issue with too many # This is set because of an issue with too many
# singularity containers launching at once, they # singularity containers launching at once, they
# cause an singularity error with exit code 255. # cause an singularity error with exit code 255.
submitRateLimit = "2 sec" submitRateLimit = "2 sec"
} }
process { process {
executor = "LSF" executor = "LSF"
} }
params { params {
# LSF cluster set up with memory tied to cores, # LSF cluster set up with memory tied to cores,
# it can't be requested. Locked at 12G per core. # it can't be requested. Locked at 12G per core.