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Drop config

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Alexander Peltzer 2019-07-30 18:54:38 +02:00
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commit ead80fb9d0
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conf/aquila.config
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//Profile config names for nf-core/configs
params {
config_profile_description = 'A*STAR Aquila cluster profile provided by nf-core/configs.'
config_profile_contact = 'Andreas Wilm (@andreas-wilm)'
config_profile_url = 'https://www.a-star.edu.sg/'
}
singularity {
enabled = true
}
process {
beforeScript = { 'source /mnt/projects/rpd/rc/init.2017-04; module load miniconda3; set +u; source activate ' + params.container.replaceAll(/[\/:]/, '-').replaceAll(/nfcore/, 'nf-core') + "; set -u;" }
executor = 'sge'
clusterOptions = { "-l mem_free=" + task.memory.toString().replaceAll(/[\sB]/,'') }
penv = 'OpenMP'
}
params {
igenomes_base = '/nfsmounts/igenomes'
max_memory = 128.GB
max_cpus = 28
max_time = 48.h
}