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Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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The profile is configured to run with Singularity version 3.6.3-1.el7 which is part of the OS installtion and does not need to be loaded as a module.
Before running the pipeline you will need to load Java, Miniconda and Nextflow. You can do this by including the commands below in your SLURM/sbatch script:
Before running the pipeline you will need to load Java, and Nextflow. You can do this by including the commands below in your SLURM/sbatch script:
```bash
## Load Java, Miniconda and Nextflow environment modules