1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-22 00:26:03 +00:00

Merge pull request #189 from nf-core/TCLamnidis-patch-1

Move sdag queue specification block in sdag profile
This commit is contained in:
James A. Fellows Yates 2020-11-18 13:16:54 +01:00 committed by GitHub
commit f3c7b36e3d
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23

View file

@ -20,7 +20,6 @@ singularity {
process {
executor = 'slurm'
queue = { task.memory > 756.GB || task.cpus > 64 ? 'supercruncher': task.time <= 2.h ? 'short' : task.time <= 48.h ? 'medium': 'long' }
}
executor {
@ -39,9 +38,12 @@ profiles {
}
sdag {
params {
config_profile_description = 'SDAG MPI-SHH profile, provided by nf-core/configs.'
max_memory = 2.TB
max_cpus = 128
config_profile_description = 'SDAG MPI-SHH profile, provided by nf-core/configs.'
max_memory = 2.TB
max_cpus = 128
}
process {
queue = { task.memory > 756.GB || task.cpus > 64 ? 'supercruncher': task.time <= 2.h ? 'short' : task.time <= 48.h ? 'medium': 'long' }
}
}
}