From f5e2a9f9f3443ae4be1885cd816ae0bc62cc27fc Mon Sep 17 00:00:00 2001 From: Piotr Faba Date: Wed, 27 May 2020 16:55:37 +0200 Subject: [PATCH] try without dummy.config: use relative path --- .github/workflows/main.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 0742e5c..0609a85 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -26,5 +26,5 @@ jobs: - name: Check ${{ matrix.profile }} profile env: SCRATCH: '~' - NXF_GLOBAL_CONFIG: ${GITHUB_WORKSPACE}/config/awsbatch.config + NXF_GLOBAL_CONFIG: awsbatch.config run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }}