From 1772f4119c391a4df4d6f7d4219b537d375485ec Mon Sep 17 00:00:00 2001 From: maxibor Date: Thu, 18 Apr 2019 11:19:53 +0200 Subject: [PATCH 1/2] adding igenomes to shh config --- conf/shh.config | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/conf/shh.config b/conf/shh.config index 159de89..020be37 100644 --- a/conf/shh.config +++ b/conf/shh.config @@ -2,7 +2,7 @@ params { config_profile_description = 'MPI SHH cluster profile provided by nf-core/configs.' config_profile_contact = 'James Fellows Yates (@jfy133)' - config_profile_url = 'https://shh.mpg.de' + config_profile_url = 'https: //shh.mpg.de' } singularity { @@ -20,4 +20,6 @@ params { max_memory = 256.GB max_cpus = 32 max_time = 2.h -} + //Illumina iGenomes reference file path + igenomes_base = "/projects1/public_data/igenomes/" +} \ No newline at end of file From 9d9ac4c3bb33f41561c402b122c36fbed8771e28 Mon Sep 17 00:00:00 2001 From: maxibor Date: Thu, 18 Apr 2019 11:22:54 +0200 Subject: [PATCH 2/2] remove whitespace --- conf/shh.config | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/conf/shh.config b/conf/shh.config index 020be37..d2feaff 100644 --- a/conf/shh.config +++ b/conf/shh.config @@ -2,7 +2,7 @@ params { config_profile_description = 'MPI SHH cluster profile provided by nf-core/configs.' config_profile_contact = 'James Fellows Yates (@jfy133)' - config_profile_url = 'https: //shh.mpg.de' + config_profile_url = 'https://shh.mpg.de' } singularity {