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Fix HOPS huamn ref path

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James A. Fellows Yates 2021-06-07 10:48:35 +02:00 committed by GitHub
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conf/pipeline/eager/shh.config
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@ -164,7 +164,7 @@ profiles {
params { params {
config_profile_description = 'Rough HOPS screening MPI-SHH profile, provided by nf-core/configs.' config_profile_description = 'Rough HOPS screening MPI-SHH profile, provided by nf-core/configs.'
fasta = '/projects1/Reference_Genomes/Human/HG19/hg19_complete.fasta' fasta = '/projects1/Reference_Genomes/Human/HG19/hg19_complete.fasta'
bwa_index = '/projects1/Reference_Genomes/Human/HG19/hg19_complete.fasta' bwa_index = '/projects1/Reference_Genomes/Human/HG19/'
fasta_index = '/projects1/Reference_Genomes/Human/HG19/hg19_complete.fasta.fai' fasta_index = '/projects1/Reference_Genomes/Human/HG19/hg19_complete.fasta.fai'
seq_dict = '/projects1/Reference_Genomes/Human/HG19/hg19_complete.dict' seq_dict = '/projects1/Reference_Genomes/Human/HG19/hg19_complete.dict'
bwaalnn = 0.01 bwaalnn = 0.01