From fdac67afbf784486fa38d4988d19865c455e9d22 Mon Sep 17 00:00:00 2001
From: Marc Trunjer Kusk Nielsen <marc.mtk@gmail.com>
Date: Tue, 31 Aug 2021 13:58:39 +0200
Subject: [PATCH] Create computerome.config

---
 conf/computerome.config | 26 ++++++++++++++++++++++++++
 1 file changed, 26 insertions(+)
 create mode 100644 conf/computerome.config

diff --git a/conf/computerome.config b/conf/computerome.config
new file mode 100644
index 0000000..1085b49
--- /dev/null
+++ b/conf/computerome.config
@@ -0,0 +1,26 @@
+singularityDir = "/gpfs/scratch/${USER}/singularity_images_nextflow"
+
+//Profile config names for nf-core/configs
+params {
+  config_profile_description = 'Computerome 2.0 cluster profile provided by nf-core/configs.'
+  config_profile_contact = 'Marc Trunjer Kusk Nielsen (@marcmtk)'
+  config_profile_url = 'https://www.computerome.dk/'
+}
+
+singularity {
+  enabled = true
+  autoMounts = true
+  cacheDir = singularityDir
+}
+
+process {
+  beforeScript = 'module load singularity squashfs-tools'
+  executor = 'pbs'
+  queue = { task.memory >= 192.GB ? 'fatnode': 'thinnode'}
+}
+
+params {
+  max_memory = 1500.GB
+  max_cpus = 40
+  max_time = 168.h
+}