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update to current java+nextflow module combination

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qlr900 2022-07-07 14:30:48 +02:00
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docs/ku_sund_dangpu.md
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@ -12,8 +12,8 @@ Before running the pipeline you will need to load Nextflow and Singularity using
```bash
## Load Nextflow and Singularity environment modules
module purge
module load openjdk/11.0.0 nextflow/22.04.3 singularity/3.8.0
# alternative
module load java/11.0.15 nextflow/22.04.4 singularity/3.8.0
# alternative modules for older nextflow version (v.21) that works with java 8:
# module load jdk/1.8.0_291 nextflow/21.04.1.5556 singularity/3.8.0
export NXF_OPTS='-Xms1g -Xmx4g'
export NXF_HOME=/projects/dan1/people/${USER}/cache/nxf-home