diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 8c6d23b..d4e0232 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -23,9 +23,13 @@ jobs: run: | wget -qO- get.nextflow.io | bash sudo mv nextflow /usr/local/bin/ + echo ~ touch ~/dummy.config - name: Check ${{ matrix.profile }} profile env: SCRATCH: '~' NXF_GLOBAL_CONFIG: ~/dummy.config - run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }} + run: | + echo $SCRATCH + echo $NXF_GLOBAL_CONFIG + nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }}