params { config_profile_description = 'The Jackson Laboratory Sumner HPC profile provided by nf-core/configs.' config_profile_contact = 'Asaf Peer (@peera)' config_profile_url = 'https://jacksonlaboratory.sharepoint.com/sites/ResearchIT/SitePages/Welcome-to-Sumner.aspx' singularity_cache_dir = '/fastscratch/singularity_cache_nfcore' } executor.$slurm.queueSize = 250 process { executor = "slurm" queue = "compute" clusterOptions = {task.time < 72.h ? '-q batch' : '-q long'} module = "slurm" beforeScript = 'module load singularity' } singularity{ enabled = true autoMounts = true cacheDir = params.singularity_cache_dir } params { max_memory = 320.GB max_cpus = 32 max_time = 336.h }