params { config_profile_description = 'Van Andel Institute HPC profile provided by nf-core/configs.' config_profile_contact = 'Nathan Spix (@njspix)' config_profile_url = 'https://vanandelinstitute.sharepoint.com/sites/SC/SitePages/HPC3-High-Performance-Cluster-and-Cloud-Computing.aspx' max_memory = 250.GB max_cpus = 40 max_time = 640.h } process { beforeScript = 'alias singularity=/varidata/research/software/singularity/singularity-ce-3.8.2/bin/singularity' executor = 'pbs' queue = { task.time <= 48.h ? 'shortq' : 'longq' } maxRetries = 2 } singularity { enabled = true autoMounts = true }