// Profile config names for nf-core/configs

params {
  // Specific nf-core/configs params
  config_profile_contact = 'Maxime Garcia (@MaxUlysse)'
  config_profile_description = 'nf-core/sarek MUNIN profile provided by nf-core/configs'
  config_profile_url = 'https://ki.se/forskning/barntumorbanken'

  // Specific nf-core/sarek configs params
  max_memory = 752.GB
  max_cpus = 46
  max_time = 72.h

  // Specific nf-core/sarek params
  annotation_cache = true
  pon = '/data1/PON/vcfs/BTB.PON.vcf.gz'
  pon_index = '/data1/PON/vcfs/BTB.PON.vcf.gz.tbi'
  snpEff_cache = '/data1/cache/snpEff/'
  vep_cache = '/data1/cache/VEP/'
}

// Specific nf-core/sarek configuration
withLabel:sentieon {
  module = {params.sentieon ? 'sentieon/201808.05' : ''}
  container = {params.sentieon ? '' : 'nfcore/sarek:dev'}
}