// Profile config names for nf-core/configs params { // Specific nf-core/configs params config_profile_contact = 'Maxime Garcia (@MaxUlysse)' config_profile_description = 'nf-core/sarek MUNIN profile provided by nf-core/configs' // Specific nf-core/sarek params annotation_cache = true pon = '/data1/PON/vcfs/BTB.PON.vcf.gz' pon_index = '/data1/PON/vcfs/BTB.PON.vcf.gz.tbi' snpEff_cache = '/data1/cache/snpEff/' vep_cache = '/data1/cache/VEP/' } // Specific nf-core/sarek process configuration process { withLabel:sentieon { module = {params.sentieon ? 'sentieon/201808.05' : null} container = {params.sentieon ? null : container} } }