//Nextflow config file for running on AWS batch params { awsqueue = '' awsregion = '' config_profile_contact = 'Alexander Peltzer (@apeltzer)' config_profile_description = 'AWSBATCH Cloud Profile' config_profile_name = 'AWSBATCH' config_profile_url = 'https://aws.amazon.com/batch/' tracedir = './' } aws.region = params.awsregion process.executor = 'awsbatch' process.queue = params.awsqueue executor.awscli = '/home/ec2-user/miniconda/bin/aws'