// Nextflow config file for running on Google Cloud Life Sciences params { config_profile_description = 'Google Cloud Life Sciences Profile' config_profile_contact = 'Evan Floden, Seqera Labs (@evanfloden)' config_profile_url = 'https://cloud.google.com/life-sciences' google_zone = 'europe-west2-c' google_bucket = false google_debug = false google_preemptible = true } process.executor = 'google-lifesciences' google.zone = params.google_zone google.lifeSciences.debug = params.google_debug workDir = params.google_bucket google.lifeSciences.preemptible = params.google_preemptible if (google.lifeSciences.preemptible) { process.errorStrategy = { task.exitStatus in [8,10,14] ? 'retry' : 'terminate' } process.maxRetries = 5 } process.machineType = { task.memory > task.cpus * 6.GB ? ['custom', task.cpus, task.cpus * 6656].join('-') : null }