//Profile config names for nf-core/configs
params {
  config_profile_description = 'Big iron cluster profile provided by nf-core/configs.'
  config_profile_contact = 'Szilveszter Juhos (@szilva)'
  config_profile_url = ''
}

process {
  executor = 'local'
}

singularity {
  enabled = true
  autoMounts = true
}

// To use docker instead of singularity, use nextflow run -profile munin,docker
docker {
  enabled = false
  mountFlags = 'z'
  fixOwnership = true
}

params {
  saveReference = true

  max_memory = 128.GB
  max_cpus = 16
  max_time = 72.h
  // illumina iGenomes reference file paths on UPPMAX
  igenomes_base = '/data1/references/igenomes/'
}