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52 lines
1.1 KiB
Plaintext
52 lines
1.1 KiB
Plaintext
// Profile config names for nf-core/configs
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params {
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config_profile_description = 'Hasta, a local cluster setup at Clinical Genomics, Stockholm.'
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config_profile_contact = 'Clinical Genomics, Stockholm'
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config_profile_url = 'https://github.com/Clinical-Genomics'
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priority = null
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clusterOptions = null
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schema_ignore_params = "priority,clusterOptions"
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}
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singularity {
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enabled = true
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envWhitelist = ['_JAVA_OPTIONS']
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}
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params {
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max_memory = 180.GB
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max_cpus = 36
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max_time = 336.h
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}
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process {
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executor = 'slurm'
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clusterOptions = { "-A $params.priority ${params.clusterOptions ?: ''}" }
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}
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profiles {
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stub_prio {
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params {
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priority = 'development'
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clusterOptions = "--qos=low"
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max_memory = 6.GB
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max_cpus = 1
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max_time = 1.h
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}
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}
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dev_prio {
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params {
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priority = 'development'
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clusterOptions = "--qos=low"
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}
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}
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prod_prio {
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params {
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priority = 'production'
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clusterOptions = "--qos=low"
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}
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}
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}
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