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74 lines
1.8 KiB
Plaintext
74 lines
1.8 KiB
Plaintext
params {
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config_profile_description = 'MPCDF HPC profiles (unoffically) provided by nf-core/configs.'
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config_profile_contact = 'James Fellows Yates (@jfy133)'
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config_profile_url = 'https://www.mpcdf.mpg.de/services/supercomputing'
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}
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profiles {
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cobra {
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cleanup = true
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process {
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beforeScript = 'module load singularity'
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executor = 'slurm'
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}
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executor {
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queueSize = 8
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pollInterval = '1 min'
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queueStatInterval = '5 min'
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}
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// Set $NXF_SINGULARITY_CACHEDIR in your ~/.bash_profile
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// to stop downloading the same image for every run
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singularity {
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enabled = true
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autoMounts = true
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}
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params {
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config_profile_description = 'MPCDF cobra profile (unofficially) provided by nf-core/configs.'
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max_memory = 725.GB
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max_cpus = 40
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max_time = 24.h
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}
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}
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raven {
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cleanup = true
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process {
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beforeScript = 'module load singularity'
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executor = 'slurm'
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}
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executor {
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queueSize = 30
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pollInterval = '1 min'
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queueStatInterval = '5 min'
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}
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// Set $NXF_SINGULARITY_CACHEDIR in your ~/.bash_profile
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// to stop downloading the same image for every run
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singularity {
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enabled = true
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autoMounts = true
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}
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params {
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config_profile_description = 'MPCDF raven profile (unofficially) provided by nf-core/configs.'
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max_memory = 2000000.MB
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max_cpus = 72
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max_time = 24.h
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}
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}
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debug {
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cleanup = false
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}
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}
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