mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-14 13:43:09 +00:00
64 lines
1.5 KiB
Text
64 lines
1.5 KiB
Text
// Profile config names for nf-core/configs
|
|
|
|
params {
|
|
// Specific nf-core/configs params
|
|
config_profile_contact = 'James Fellows Yates (@jfy133)'
|
|
config_profile_description = 'nf-core/eager MPCDF profile provided by nf-core/configs'
|
|
}
|
|
|
|
profile {
|
|
cobra {
|
|
// Specific nf-core/eager process configuration
|
|
process {
|
|
|
|
withName: malt {
|
|
maxRetries = 1
|
|
memory = 725.GB
|
|
cpus = 40
|
|
time = 24.h
|
|
}
|
|
|
|
withLabel:'sc_tiny'{
|
|
cpus = { check_max( 1, 'cpus' ) }
|
|
memory = { check_max( 1.GB * task.attempt, 'memory' ) }
|
|
time = 24.h
|
|
}
|
|
|
|
withLabel:'sc_small'{
|
|
cpus = { check_max( 1, 'cpus' ) }
|
|
memory = { check_max( 4.GB * task.attempt, 'memory' ) }
|
|
time = 24.h
|
|
}
|
|
|
|
withLabel:'sc_medium'{
|
|
cpus = { check_max( 1, 'cpus' ) }
|
|
memory = { check_max( 8.GB * task.attempt, 'memory' ) }
|
|
time = 24.h
|
|
}
|
|
|
|
withLabel:'mc_small'{
|
|
cpus = { check_max( 2 * task.attempt, 'cpus' ) }
|
|
memory = { check_max( 4.GB * task.attempt, 'memory' ) }
|
|
time = 24.h
|
|
}
|
|
|
|
withLabel:'mc_medium' {
|
|
cpus = { check_max( 4 * task.attempt, 'cpus' ) }
|
|
memory = { check_max( 8.GB * task.attempt, 'memory' ) }
|
|
time = 24.h
|
|
}
|
|
|
|
withLabel:'mc_large'{
|
|
cpus = { check_max( 8 * task.attempt, 'cpus' ) }
|
|
memory = { check_max( 16.GB * task.attempt, 'memory' ) }
|
|
time = 24.h
|
|
}
|
|
|
|
withLabel:'mc_huge'{
|
|
cpus = { check_max( 32 * task.attempt, 'cpus' ) }
|
|
memory = { check_max( 256.GB * task.attempt, 'memory' ) }
|
|
time = 24.h
|
|
}
|
|
}
|
|
}
|
|
}
|