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nf-configs/conf/pipeline/sarek/uppmax.config
2020-02-20 17:14:18 +01:00

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// sarek/uppmax specific profile config
params {
config_profile_contact = 'Maxime Garcia (@MaxUlysse)'
config_profile_description = 'nf-core/sarek uppmax profile provided by nf-core/configs'
}
if (hostname ==~ "i.*") {
singularity {
cacheDir = "${params.containers_path}"
}
}
params {
igenomeIgnore = true
genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle'
}